What is StokesDT?
StokesDT is a parallel toolkit for performing large-scale Brownian and Stokesian dynamics simulations on UNIX/LINUX platforms. StokesDT is written in C++ and is optimized for x86-based multicore and Intel MIC-based manycore architectures.
Highlights
- Uses SPME for computing long range hydrodynamic interactions.
- Uses Lanczos for computing Brownian displacements.
- Computes bonded forces and steric forces.
- Can use GPU and Intel Xeon Phi accelerators.
- Provides a flexible, object-oriented user interface which can be used to develop customized hydrodynamic simulation codes.
- Matlab interface available.
News
- StokesDT v0.3.0 has been released. Downloads.
- StokesDT v0.2.0 has been released. Downloads.
- StokesDT v0.1.0 has been released. Downloads.
Project Members at Georgia Tech
- Edmond Chow (Associate Professor in the School of Computational Science and Engineering)
- Xing Liu (Ph.D., currently at IBM T. J. Watson Research Center)